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Table 1 Identified genetic variants passing quality control

From: Identification of a novel mutation in the factor VIII gene causing severe haemophilia A

Transcript Variant

Protein Variant

Gene Region

Variant Type

Activity

Classification

Impact

CADD Score

dbSNP ID

AFC Freq.

1000 Genomes Freq.

c.6115 + 103 T > C

Intronic

SNV

normal

Benign

 

<  10

4,074,307

22.442

44.079

c.5998 + 91 T > A

Intronic

SNV

normal

Benign

 

<  10

4,898,352

22.653

44.132

c.5411_5413delTCT

p.F1804del

Exonic

Deletion

loss

Likely Pathogenic

in-frame

*

   

c.3780C > G

p.D1260E

Exonic

SNV

gain

Benign

missense

<  10

1,800,291

18.924

25.642

c.1010-27G > A

Intronic

SNV

normal

Benign

 

<  10

7,058,826

11.328

7.735

  1. Transcript ID NM_000132.3, chromosome X, cytoband q28, gene F8. * CADD score can not be estimated for deletions
  2. Freq frequency, CADD combined annotation dependent depletion